chr9:120464147:G>A Detail (hg19)

Information

Genome

Assembly Position
hg19 chr9:120,464,147-120,464,147
hg38 chr9:117,701,869-117,701,869 View the variant detail on this assembly version.

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.628
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.058 asthma The TLR4 single-nucleotide polymorphisms rs1927911, rs10759931, and rs6478317 mo... BeFree 24243740 Detail
Annotation

Annotations

DescrptionSourceLinks
The TLR4 single-nucleotide polymorphisms rs1927911, rs10759931, and rs6478317 modified the associati... DisGeNET Detail
Gene
-
dbSNP
rs10759931 dbSNP
Genome
hg19
Position
chr9:120,464,147-120,464,147
Variant Type
snv
Reference Allele
G
Alternative Allele
A
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs10759931
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.6282
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
10528
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16760
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